PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0214s0033.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 233aa    MW: 25132.1 Da    PI: 4.7643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0214s0033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.2e-183888155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr++   g+Wv+e+r+p   +k++r++lg+f t e+Aa+a++ a+++l+g
  Kalax.0214s0033.1.p 38 PVYRGVRRRN-AGKWVCELREP---NKKTRIWLGTFPTLEMAARAHDVAALALRG 88
                         68*****887.8*********8...347*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.7E-143888IPR001471AP2/ERF domain
SMARTSM003801.2E-2839102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-313998IPR001471AP2/ERF domain
PROSITE profilePS5103222.3923996IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-213998IPR016177DNA-binding domain
CDDcd000183.19E-294098No hitNo description
PRINTSPR003671.5E-84051IPR001471AP2/ERF domain
PRINTSPR003671.5E-86278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDVSDLSNDH VSSHAPLLAS SNPKKRAGRK KFKETRHPVY RGVRRRNAGK WVCELREPNK  60
KTRIWLGTFP TLEMAARAHD VAALALRGSR ACLNFADSAW RLPVPESGDA EEIRRAAVEA  120
AEMFRPGTTS FNDGGGASTS SSSGSCGDDE FDEVMIGSNG DGGVSWSGSG GGMFEMEIED  180
FLGMSSWGLM VEMAEGLMMS PPPPPPPPPP YWEAVGGQEM DNDDVSLWSF SF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-134095662ATERF1
2gcc_A5e-134095662ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858875.13e-74PREDICTED: dehydration-responsive element-binding protein 1C-like
SwissprotQ9FJ932e-65DRE1D_ARATH; Dehydration-responsive element-binding protein 1D
TrEMBLA0A022PVI84e-74A0A022PVI8_ERYGU; Uncharacterized protein
STRINGSolyc03g026270.1.12e-66(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-45C-repeat/DRE binding factor 2